Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790278.1_cds_XP_016500921.1_1389
CDS Infomation

[gene=LOC107819330] [db_xref=GeneID:107819330] [protein=probable terpene synthase 3] [protein_id=XP_016500921.1] [location=complement(join(63493..63783,64272..64520,64618..64759,65197..65569,65688..65967,66658..66789))] [gbkey=CDS]
Sequence

ATGGATGGTAATGCTGGAGAAGTAGCTAATCAAGTGTGTCCTCAAACTGTTGTGGCAGAG
GTTACACGGCGCTGTGGCAATCACCATCCTACTGTTTGGGGAGACCATTTTCTTGCCTAT
GCTCATCTCTCGGGAGCCAATGAATGGGAAAAGAAACAGCATGAACACCTAAAAGAAGAA
GTGCGAAAAATGCTAGAGATGTCTCCTTCAAAATCTTTGCAAACTCTTGACCTGATCAAC
GCAATCCAATGTCTTGGAATAGCGTACCATTTTGAACATGAGATTGAGGAGTCATTGGCC
TGTATCTACAGTTGTTATGACCAATTGAATGCTGAAGCTGATGAGACTGACCTCCATCTT
GTTGCTCTGCGGTTTCGAGTACTTAGGCAACACGGTTATTATGTCTCATCTCATGTTTTT
AGGAAGTTCACTGATGACCAAGGAAATTACAACAAAGCATTGGTTAGCGACGTGCAAGGA
TTGTTGAGCCTGTATGAGGCAACACAATTCAGAGTACACAATGAAGAAATACTGGACGAA
GCAGTTAATTTCACCACCACTCATTTAAAGCTATTGTTGCTTACATTGAGCAATTCTTTC
GCGATGAAAATCAGCAATGCACTAAAGTATCCAATCAACTATACTATGGTGACAGTAGCA
ACGAGGAAATACCTATCGTTTTACCAAGAAGATAAAGCACATGATGATGTGTTGCTAAAT
TTTGCAAAATTGGACTACAACATATTGCAGAAGATGCATAAAAGTGAGCTATGTGATATC
ACAAGGTGGAACATTGACGACGTTTCAGAACAGTTACCGTCATATATGAAGCTTTATTAC
CTAGCTCTTCTAGATGTTTACGTTGAAATTGAGAAAGAGTTGGCAAAGGAAAACAACTCA
TTTCAAGTTAAATATTCCATAGCTGAGATGAAAAAGTTGATAAATGCATATTTTCAAGAG
GCTAAATGGTATCATGGAAATAACGTCCCAACAATGGAACAGTATGTGAAAAATGGAATT
CGATCTAGCACTATCCCATGTCTTGCGACTCTCTCTTGGTTAGGCATTGGAAATGAAGCA
ACGAAGGAGGCACACGACTGGCTTGCAAGTGAACCTCTAATTTTGGTTGCTTCTTCTATC
ATTGCTAGATTATCAAATGATATTGTATCACATGAGAGAGAGCAAGAAGGAGGAGATATA
TCAGGTGTCGAATGTTACATGAATGAATATGGCGTCACAAAGGAAGAAGCATACGTGGAG
ATTAGGAAAATAATGGATAATAGTTGGAAGGATTTGAATCGAGAATGCCTAAAACGTACA
GTTGTACCTAGGGTTTTGCTCATGCCAGTGCTCAACCTTGCTAGGATGTCGGAGTTCTCA
TACAAAGATGAAGATTCCTATACTGTTTCCAAAAATGACTTGAGAGATATCATCTCTGAG
GTGCTAGTTGATCCCATTACAATATGA

Peptide Sequence

PEP ID

XP_016500921.1
PEP Infomation

PREDICTED: probable terpene synthase 3 [Nicotiana tabacum]
Sequence

MDGNAGEVANQVCPQTVVAEVTRRCGNHHPTVWGDHFLAYAHLSGANEWEKKQHEHLKEE
VRKMLEMSPSKSLQTLDLINAIQCLGIAYHFEHEIEESLACIYSCYDQLNAEADETDLHL
VALRFRVLRQHGYYVSSHVFRKFTDDQGNYNKALVSDVQGLLSLYEATQFRVHNEEILDE
AVNFTTTHLKLLLLTLSNSFAMKISNALKYPINYTMVTVATRKYLSFYQEDKAHDDVLLN
FAKLDYNILQKMHKSELCDITRWNIDDVSEQLPSYMKLYYLALLDVYVEIEKELAKENNS
FQVKYSIAEMKKLINAYFQEAKWYHGNNVPTMEQYVKNGIRSSTIPCLATLSWLGIGNEA
TKEAHDWLASEPLILVASSIIARLSNDIVSHEREQEGGDISGVECYMNEYGVTKEEAYVE
IRKIMDNSWKDLNRECLKRTVVPRVLLMPVLNLARMSEFSYKDEDSYTVSKNDLRDIISE
VLVDPITI

Transcript Sequence

Gene sequence data has not been registered.